Publications of M. Iskar

Publications of M. Iskar

The individual publication lists here have to be considered only in the context of the Bork Group.
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2019 1 publication(s).
16.
Quantitative Proteome Landscape of the NCI-60 Cancer Cell Lines.
Guo T, Luna A, Rajapakse VN, Koh CC, Wu Z, Liu W, Sun Y, Gao H, Menden MP, Xu C, Calzone L, Martignetti L, Auwerx C, Buljan M, Banaei-Esfahani A, Ori A, Iskar M, Gillet L, Bi R, Zhang J, Zhang H, Yu C, Zhong Q, Varma S, Schmitt U, Qiu P, Zhang Q, Zhu Y, Wild PJ, Garnett MJ, Bork P, Beck M, Liu K, Saez-Rodriguez J, Elloumi F, Reinhold WC, Sander C, Pommier Y, Aebersold R
2019 Nov 22; 21: 664-680. PubMed: 31733513.
Abstract + PDF
2016 3 publication(s).
15.
CART - a chemical annotation retrieval toolkit.
Deghou S, Zeller G, Iskar M, Driessen M, Castillo M, van Noort V, Bork P
2016 Sep 15; 32(18): 2869-71. Epub 2016 Jun 2; PubMed: 27256313.
Abstract + PDF
14.
Spatiotemporal variation of mammalian protein complex stoichiometries.
Ori A, Iskar M, Buczak K, Kastritis P, Parca L, Andrés-Pons A, Singer S, Bork P, Beck M
2016 Mar 14; 17(1): 47. Epub 2016 Mar 14; PubMed: 26975353.
Abstract + PDF
13.
The endosomal transcriptional regulator RNF11 integrates degradation and transport of EGFR.
Scharaw S, Iskar M, Ori A, Boncompain G, Laketa V, Poser I, Lundberg E, Perez F, Beck M, Bork P, Pepperkok R
2016 Nov 21; 215(4): 543-558. PubMed: 27872256.
Abstract + PDF
2015 3 publication(s).
12.
Discovery and validation of the antimetastatic activity of citalopram in colorectal cancer.
2015 Apr-Jun; 2(2): e975080. PubMed: 27308430.
Abstract + PDF
11.
Histone deacetylase inhibitors cause the selective depletion of bromodomain containing proteins.
Mackmull MT, Iskar M, Parca L, Singer S, Bork P, Ori A, Beck M
2015 May 9; 14(5): 1350-60. Epub 2015 Mar 9; PubMed: 25755299.
Abstract + PDF
10.
Integrated Transcriptome and Proteome Analyses Reveal Organ-Specific Proteome Deterioration in Old Rats.
Ori A, Toyama BH, Harris MS, Bock T, Iskar M, Bork P, Ingolia NT, Hetzer MW, Beck M
2015 Sep 23; 1(3): 224-37. Epub 2015 Sep 17; PubMed: 27135913.
Abstract + PDF
2014 2 publication(s).
9.
Luminal signalling links cell communication to tissue architecture during organogenesis.
Durdu S, Iskar M, Revenu C, Schieber N, Kunze A, Bork P, Schwab Y, Gilmour D
2014 Nov 6; 515(7525): 120-4. Epub 2014 Oct 22; PubMed: 25337877.
Abstract + PDF
8.
Novel drug candidates for the treatment of metastatic colorectal cancer through global inverse gene expression profiling.
van Noort V, Schölch S, Iskar M, Zeller G, Ostertag K, Schweitzer C, Werner K, Weitz J, Koch M, Bork P
2014 Oct 15; 74(20): 5690-9. Epub 2014 Jul 18; PubMed: 25038229.
Abstract + PDF
2013 3 publication(s).
7.
Characterization of drug-induced transcriptional modules: towards drug repositioning and functional understanding.
Iskar M, Zeller G, Blattmann P, Campillos M, Kuhn M, Kaminska KH, Runz H, Gavin AC, Pepperkok R, van Noort V, Bork P
2013 Apr 30; 9: 662. PubMed: 23632384.
Abstract + PDF
6.
Cell type-specific nuclear pores: a case in point for context-dependent stoichiometry of molecular machines.
Ori A, Banterle N, Iskar M, Andrés-Pons A, Escher C, Khanh Bui H, Sparks L, Solis-Mezarino V, Rinner O, Bork P, Lemke EA, Beck M
2013 Mar 19; 9: 648. PubMed: 23511206.
Abstract + PDF
5.
DvD: An R/Cytoscape pipeline for drug repurposing using public repositories of gene expression data.
Pacini C, Iorio F, Gonçalves E, Iskar M, Klabunde T, Bork P, Saez-Rodriguez J
2013 Jan 1; 29(1): 132-4. Epub 2012 Nov 4; PubMed: 23129297.
Abstract + PDF
2012 1 publication(s).
4.
Drug discovery in the age of systems biology: the rise of computational approaches for data integration.
2012 Aug 5; 23(4): 609-16. Epub 2011 Dec 5; PubMed: 22153034.
Abstract + PDF
2011 2 publication(s).
3.
Network neighbors of drug targets contribute to drug side-effect similarity.
2011; 6(7): e22187. PubMed: 21765950.
Abstract + PDF
2.
Prediction of drug combinations by integrating molecular and pharmacological data.
2011 Dec; 7(12): e1002323. PubMed: 22219721.
Abstract + PDF
2010 1 publication(s).
1.
Drug-Induced Regulation of Target Expression.
2010 Sep 9; 6(9): . PubMed: 20838579.
Abstract + PDF