Publications of Bork Group in the journal "Cell".

Publications of Bork Group in the journal "Cell".

Authors in this color are/were of Bork Group. [Altmetric off].
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2024 3 publication(s).
18.
Emergence of community behaviors in the gut microbiota upon drug treatment.
Garcia-Santamarina S, Kuhn M, Devendran S, Maier L, Driessen M, Mateus A, Mastrorilli E, Brochado AR, Savitski MM, Patil KR, Zimmermann M, Bork P, Typas A
Cell.
2024 Oct 31; 187(22): 6346-6357.e20. PubMed: 39321801.
Abstract
17.
Fecal microbial load is a major determinant of gut microbiome variation and a confounder for disease associations.
Nishijima S, Stankevic E, Aasmets O, Schmidt TSB, Nagata N, Keller MI, Ferretti P, Juel HB, Fullam A, Robbani SM, Schudoma C, Hansen JK, Holm LA, Israelsen M, Schierwagen R, Torp N, Telzerow A, Hercog R, Kandels S, Hazenbrink DHM, Arumugam M, Bendtsen F, Brøns C, Fonvig CE, Holm JC, Nielsen T, Pedersen JS, Thiele MS, Trebicka J, Org E, Krag A, Hansen T, Kuhn M, Bork P, GALAXY and MicrobLiver Consortia
Cell.
2024 Nov 4; [Epub ahead of print] PubMed: 39541968.
Abstract
16.
Discovery of antimicrobial peptides in the global microbiome with machine learning.
Santos-Júnior CD, Torres MDT, Duan Y, Rodríguez Del Río Á, Schmidt TSB, Chong H, Fullam A, Kuhn M, Zhu C, Houseman A, Somborski J, Vines A, Zhao XM, Bork P, Huerta-Cepas J, de la Fuente-Nunez C, Coelho LP
Cell.
2024 Jul 11; 187(14): 3761-3778.e16. PubMed: 38843834.
Abstract
2020 1 publication(s).
15.
Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment.
Schulte-Schrepping J, Reusch N, Paclik D, Baßler K, Schlickeiser S, Zhang B, Krämer B, Krammer T, Brumhard S, Bonaguro L, De Domenico E, Wendisch D, Grasshoff M, Kapellos TS, Beckstette M, Pecht T, Saglam A, Dietrich O, Mei HE, Schulz AR, Conrad C, Kunkel D, Vafadarnejad E, Xu CJ, Horne A, Herbert M, Drews A, Thibeault C, Pfeiffer M, Hippenstiel S, Hocke A, Müller-Redetzky H, Heim KM, Machleidt F, Uhrig A, Bosquillon de Jarcy L, Jürgens L, Stegemann M, Glösenkamp CR, Volk HD, Goffinet C, Landthaler M, Wyler E, Georg P, Schneider M, Dang-Heine C, Neuwinger N, Kappert K, Tauber R, Corman V, Raabe J, Kaiser KM, Vinh MT, Rieke G, Meisel C, Ulas T, Becker M, Geffers R, Witzenrath M, Drosten C, Suttorp N, von Kalle C, Kurth F, Händler K, Schultze JL, Aschenbrenner AC, Li Y, Nattermann J, Sawitzki B, Saliba AE, Sander LE, Deutsche COVID-19 OMICS Initiative (DeCOI) , Angelov A, Bals R, Bartholomäus A, Becker A, Bezdan D, Bonifacio E, Bork P, Clavel T, Colome-Tatche M, Diefenbach A, Dilthey A, Fischer N, Förstner K, Frick JS, Gagneur J, Goesmann A, Hain T, Hummel M, Janssen S, Kalinowski J, Kallies R, Kehr B, Keller A, Kim-Hellmuth S, Klein C, Kohlbacher O, Korbel J, Kurth I, Landthaler M, Li Y, Ludwig K, Makarewicz O, Marz M, McHardy A, Mertes C, Nöthen M, Nürnberg P, Ohler U, Ossowski S, Overmann J, Peter S, Pfeffer K, Poetsch AR, Pühler A, Rajewsky N, Ralser M, Rieß O, Ripke S, Nunes da Rocha U, Rosenstiel P, Saliba AE, Sander LE, Sawitzki B, Schiffer P, Schulte EC, Schultze JL, Sczyrba A, Stegle O, Stoye J, Theis F, Vehreschild J, Vogel J, von Kleist M, Walker A, Walter J, Wieczorek D, Ziebuhr J
Cell.
2020 09 17; 182(6): 1419-1440.e23. PubMed: 32810438.
Abstract + PDF
2019 4 publication(s).
14.
Marine DNA Viral Macro- and Microdiversity from Pole to Pole.
Gregory AC, Zayed AA, Conceição-Neto N, Temperton B, Bolduc B, Alberti A, Ardyna M, Arkhipova K, Carmichael M, Cruaud C, Dimier C, Domínguez-Huerta G, Ferland J, Kandels S, Liu Y, Marec C, Pesant S, Picheral M, Pisarev S, Poulain J, Tremblay JÉ , Vik D, Tara Oceans coordinators , Babin M, Bowler C, Culley AI, De Vargas C, Dutilh BE, Iudicone D, Karp-Boss L, Roux S, Sunagawa S, Wincker P, Sullivan MB, Collaborators , Acinas SG, Babin M, Bork P, Boss E, Bowler C, Cochrane G, De Vargas C, Follows M, Gorsky G, Grimsley N, Guidi L, Hingamp P, Iudicone D, Jaillon O, Kandels-Lewis S, Karp-Boss L, Karsenti E, Not F, Ogata H, Pesant S, Poulton N, Raes J, Sardet C, Speich S, Stemmann L, Sullivan MB, Sunagawa S, Wincker P.
Cell.
2019 May 16; 177(5): 1109-1123.e14. PubMed: 31031001.
Abstract + PDF
13.
Global Trends in Marine Plankton Diversity across Kingdoms of Life.
Ibarbalz FM, Henry N, Brandão MC, Martini S, Busseni G, Byrne H, Coelho LP, Endo H, Gasol JM, Gregory AC, Mahé F, Rigonato J, Royo-Llonch M, Salazar G, Sanz-Sáez I, Scalco E, Soviadan D, Zayed AA, Zingone A, Labadie K, Ferland J, Marec C, Kandels S, Picheral M, Dimier C, Poulain J, Pisarev S, Carmichael M, Pesant S, Tara Oceans coordinators , Babin M, Boss E, Iudicone D, Jaillon O, Acinas SG, Ogata H, Pelletier E, Stemmann L, Sullivan MB, Sunagawa S, Bopp L, De Vargas C, Karp-Boss L, Wincker P, Lombard F, Bowler C, Zinger L, Collaborators , Acinas SG, Babin M, Bork P, Boss E, Bowler C, Cochrane G, De Vargas C, Follows M, Gorsky G, Grimsley N, Guidi L, Hingamp P, Iudicone D, Jaillon O, Kandels S, Karp-Boss L, Karsenti E, Not F, Ogata H, Pesant S, Poulton N, Raes J, Sardet C, Speich S, Stemmann L, Sullivan MB, Sunagawa S, Wincker P.
Cell.
2019 Nov 14; 179(5): 1084-1097.e21. PubMed: 31730851.
Abstract + PDF
12.
Disentangling Genetic and Environmental Effects on the Proteotypes of Individuals.
Romanov N, Kuhn M, Aebersold R, Ori A, Beck M, Bork P
Cell.
2019 May 16; 177(5): 1308-1318.e10. PubMed: 31031010.
Abstract + PDF
11.
Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome.
Salazar G, Paoli L, Alberti A, Huerta-Cepas J, Ruscheweyh HJ, Cuenca M, Field CM, Coelho LP, Cruaud C, Engelen S, Gregory AC, Labadie K, Marec C, Pelletier E, Royo-Llonch M, Roux S, Sánchez P, Uehara H, Zayed AA, Zeller G, Carmichael M, Dimier C, Ferland J, Kandels S, Picheral M, Pisarev S, Poulain J, Tara Oceans Consortium Coordinators , Acinas SG, Babin M, Bork P, Bowler C, De Vargas C, Guidi L, Hingamp P, Iudicone D, Karp-Boss L, Karsenti E, Ogata H, Pesant S, Speich S, Sullivan MB, Wincker P, Sunagawa S
Cell.
2019 Nov 14; 179(5): 1068-1083.e21. PubMed: 31730850.
Abstract + PDF
2018 3 publication(s).
10.
Pervasive Protein Thermal Stability Variation during the Cell Cycle.
Becher I, Andrés-Pons A, Romanov N, Stein F, Schramm M, Baudin F, Helm D, Kurzawa N, Mateus A, Mackmull MT, Typas A, Müller CW, Bork P, Beck M, Savitski MM
Cell.
2018 May 31; 173(6): 1495-1507.e18. PubMed: 29706546.
Abstract + PDF
9.
Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance.
Rubio-Cosials A, Schulz EC, Lambertsen L, Smyshlyaev G, Rojas-Cordova C, Forslund K, Karaca E, Bebel A, Bork P, Barabas O
Cell.
2018 Mar 22; 173(1): 208-220.e20. PubMed: 29551265.
Abstract + PDF
8.
The Human Gut Microbiome: From Association to Modulation.
Schmidt TSB, Raes J, Bork P
Cell.
2018 Mar 8; 172(6): 1198-1215. PubMed: 29522742.
Abstract + PDF
2011 2 publication(s).
7.
Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile.
Amlacher S, Sarges P, Flemming D, van Noort V, Kunze R, Devos DP, Arumugam M, Bork P, Hurt E
Cell.
2011 Jul 22; 146(2): 277-89. PubMed: 21784248.
Abstract + PDF
6.
Consider Context
Bork P
Cell.
2011 Mar 18; 144(6): 838. PID: 527.
PDF
2007 1 publication(s).
5.
Systematic Discovery of In Vivo Phosphorylation Networks.
Linding R, Jensen LJ, Ostheimer GJ, van Vugt MA, Jørgensen C, Miron IM, Diella F, Colwill K, Taylor L, Elder K, Metalnikov P, Nguyen V, Pasculescu A, Jin J, Park JG, Samson LD, Woodgett JR, Russell RB, Bork P, Yaffe MB, Pawson T
Cell.
2007 Jun 29; 129(7): 1415-26. Epub 2007 Jun 14; PubMed: 17570479. Media echos.
Abstract + PDF
2005 1 publication(s).
4.
Towards cellular systems in 4D.
Bork P, Serrano L
Cell.
2005 May 20; 121(4): 507-509. PubMed: 15907464.
PDF
1997 1 publication(s).
3.
Secreted fringe-like signaling molecules may be glycosyltransferases.
Yuan YP, Schultz J, Mlodzik M, Bork P
Cell.
1997 Jan 10; 88(1): 9-11. PubMed: 9019410.
PDF
1995 2 publication(s).
2.
A phosphotyrosine interaction domain.
Bork P, Margolis B
Cell.
1995 Mar 10; 80(5): 693-4. PubMed: 7534213.
PDF
1.
Polycystic kidney disease: the complete structure of the PKD1 gene and its protein. The International Polycystic Kidney Disease Consortium.
Glücksmann-Kuis MA, Tayber O, Woolf EA, Bougueleret L, Deng NH, Alperin GD, Iris F, Lakey N, Duyk G, Schneider MC, Geng L, Zhang F, Zhao ZH, Torosian S, Zhou J, Reeders ST, Bork P, Pohlschmidt M, Löhning C, Kraus B, Nowicka U, Leung ALS, Frischauf AM
Cell.
1995 Apr 21; 81(2): 289-98. PubMed: 7736581.
PDF